STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB35411.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (344 aa)    
Predicted Functional Partners:
SCB16635.1
Phytoene synthase.
  
 0.926
SCB40430.1
N-terminal double-transmembrane domain-containing protein.
   
 0.884
SCB22935.1
Fatty acid desaturase.
 
 
 0.777
SCB17916.1
Fatty acid desaturase.
 
 
 0.768
SCB13744.1
Cytochrome P450.
  
 0.658
SCB19198.1
Diacylglycerol kinase family enzyme.
   
 0.655
SCB46472.1
Fatty acid desaturase.
 
 
 0.641
SCB14707.1
Cytochrome P450.
   
 0.600
SCB22656.1
Cytochrome P450.
   
 0.600
SCB35419.1
Inositol transport system substrate-binding protein.
 
     0.583
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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