STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB35911.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (251 aa)    
Predicted Functional Partners:
SCB38456.1
Amino acid adenylation domain-containing protein.
 
 0.967
SCB20987.1
Thioesterase domain-containing protein.
  
 0.806
SCB41107.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.787
SCB35905.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.781
SCB35894.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
   0.725
SCB35900.1
Proline racemase; Belongs to the proline racemase family.
       0.722
SCB42420.1
Short chain dehydrogenase.
  
     0.707
SCB31849.1
Glutamate synthase (NADH) large subunit.
     
 0.699
SCB37108.1
DNA repair exonuclease SbcCD nuclease subunit.
    
   0.673
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.665
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.