STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB37267.1Carboxypeptidase C (cathepsin A). (509 aa)    
Predicted Functional Partners:
SCB14430.1
Beta-galactosidase.
    
 0.949
SCB44210.1
Beta-galactosidase.
    
 0.949
SCB44659.1
Ankyrin repeat.
  
 
 0.786
SCB19777.1
Hypothetical protein.
   
 
 0.783
SCB38550.1
Hypothetical protein.
   
 
 0.783
SCB33100.1
Ankyrin repeat-containing protein.
    
 0.758
SCB48828.1
Hypothetical protein.
    
 0.758
SCB07302.1
Localization factor PodJL.
    
 
 0.672
SCB37263.1
Carboxymethylenebutenolidase.
       0.482
SCB20929.1
Tetratricopeptide repeat-containing protein.
  
 
   0.452
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.