STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB39188.1Dihydroxyacetone kinase. (545 aa)    
Predicted Functional Partners:
SCB39198.1
Dihydroxyacetone kinase DhaM subunit.
 
 0.992
SCB39195.1
Dihydroxyacetone kinase, C-terminal domain.
 
0.980
SCB35196.1
Dihydroxyacetone kinase, C-terminal domain.
 
0.964
SCB35209.1
Dihydroxyacetone kinase DhaL subunit.
 
0.958
SCB18380.1
GAF domain-containing protein.
    
 
 0.788
SCB39172.1
Hypothetical protein.
 
     0.784
SCB39155.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.756
SCB39166.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.732
SCB39160.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.730
SCB39177.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
     0.696
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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