STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB39773.1Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-). (258 aa)    
Predicted Functional Partners:
SCB39760.1
Polar amino acid transport system permease protein.
  0.996
SCB39767.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
  0.996
SCB39754.1
Polar amino acid transport system substrate-binding protein.
 
  0.987
SCB38426.1
Binding-protein-dependent transport system inner membrane component.
 
  0.849
SCB22993.1
Polar amino acid transport system permease protein.
  0.847
SCB18545.1
Polar amino acid transport system permease protein.
  0.845
SCB35878.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.845
SCB47071.1
Polar amino acid transport system permease protein.
 
 0.843
SCB44312.1
Polar amino acid transport system permease protein.
  0.834
SCB45531.1
Polar amino acid transport system permease protein.
 
  0.830
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.