Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB08533.1 | SCB40248.1 | GA0061102_1001226 | GA0061102_103172 | Allantoinase. | Transporter family-2 protein. | 0.496 |
SCB08533.1 | SCB40910.1 | GA0061102_1001226 | GA0061102_103317 | Allantoinase. | Dihydroorotate oxidase B, catalytic subunit. | 0.965 |
SCB08533.1 | pyrB | GA0061102_1001226 | GA0061102_100449 | Allantoinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.997 |
SCB08533.1 | pyrD | GA0061102_1001226 | GA0061102_100174 | Allantoinase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.904 |
SCB08533.1 | pyrE | GA0061102_1001226 | GA0061102_1001120 | Allantoinase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.914 |
SCB08533.1 | pyrF | GA0061102_1001226 | GA0061102_1001271 | Allantoinase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.870 |
SCB15542.1 | SCB40248.1 | GA0061102_100448 | GA0061102_103172 | Dihydroorotase. | Transporter family-2 protein. | 0.496 |
SCB15542.1 | SCB40910.1 | GA0061102_100448 | GA0061102_103317 | Dihydroorotase. | Dihydroorotate oxidase B, catalytic subunit. | 0.954 |
SCB15542.1 | pyrB | GA0061102_100448 | GA0061102_100449 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SCB15542.1 | pyrD | GA0061102_100448 | GA0061102_100174 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.939 |
SCB15542.1 | pyrE | GA0061102_100448 | GA0061102_1001120 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.914 |
SCB15542.1 | pyrF | GA0061102_100448 | GA0061102_1001271 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.897 |
SCB40248.1 | SCB08533.1 | GA0061102_103172 | GA0061102_1001226 | Transporter family-2 protein. | Allantoinase. | 0.496 |
SCB40248.1 | SCB15542.1 | GA0061102_103172 | GA0061102_100448 | Transporter family-2 protein. | Dihydroorotase. | 0.496 |
SCB40248.1 | SCB40254.1 | GA0061102_103172 | GA0061102_103173 | Transporter family-2 protein. | Phosphinothricin acetyltransferase. | 0.814 |
SCB40248.1 | SCB40258.1 | GA0061102_103172 | GA0061102_103174 | Transporter family-2 protein. | Helix-turn-helix. | 0.772 |
SCB40248.1 | SCB40910.1 | GA0061102_103172 | GA0061102_103317 | Transporter family-2 protein. | Dihydroorotate oxidase B, catalytic subunit. | 0.705 |
SCB40248.1 | SCB41486.1 | GA0061102_103172 | GA0061102_103440 | Transporter family-2 protein. | Enterochelin esterase. | 0.654 |
SCB40248.1 | pyrB | GA0061102_103172 | GA0061102_100449 | Transporter family-2 protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.603 |
SCB40248.1 | pyrD | GA0061102_103172 | GA0061102_100174 | Transporter family-2 protein. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.660 |
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