Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB08284.1 | SCB18044.1 | GA0061102_1001195 | GA0061102_100597 | Signal transduction histidine kinase. | Hypothetical protein. | 0.942 |
SCB08284.1 | SCB24200.1 | GA0061102_1001195 | GA0061102_101022 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.953 |
SCB08284.1 | SCB33647.1 | GA0061102_1001195 | GA0061102_102128 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.432 |
SCB08284.1 | SCB38593.1 | GA0061102_1001195 | GA0061102_102857 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SCB08284.1 | SCB40920.1 | GA0061102_1001195 | GA0061102_103319 | Signal transduction histidine kinase. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.651 |
SCB08284.1 | SCB40925.1 | GA0061102_1001195 | GA0061102_103320 | Signal transduction histidine kinase. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.429 |
SCB08284.1 | SCB42292.1 | GA0061102_1001195 | GA0061102_103660 | Signal transduction histidine kinase. | Two-component system, cell cycle sensor histidine kinase and response regulator CckA. | 0.997 |
SCB08284.1 | SCB43476.1 | GA0061102_1001195 | GA0061102_104035 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.997 |
SCB08284.1 | SCB48327.1 | GA0061102_1001195 | GA0061102_10652 | Signal transduction histidine kinase. | Methyl-accepting chemotaxis protein. | 0.883 |
SCB18044.1 | SCB08284.1 | GA0061102_100597 | GA0061102_1001195 | Hypothetical protein. | Signal transduction histidine kinase. | 0.942 |
SCB18044.1 | SCB24200.1 | GA0061102_100597 | GA0061102_101022 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.831 |
SCB18044.1 | SCB33647.1 | GA0061102_100597 | GA0061102_102128 | Hypothetical protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.943 |
SCB18044.1 | SCB38593.1 | GA0061102_100597 | GA0061102_102857 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.955 |
SCB18044.1 | SCB40920.1 | GA0061102_100597 | GA0061102_103319 | Hypothetical protein. | Two-component sensor histidine kinase, contains HisKA and HATPase domains. | 0.802 |
SCB18044.1 | SCB40925.1 | GA0061102_100597 | GA0061102_103320 | Hypothetical protein. | CheY chemotaxis protein or a CheY-like REC (receiver) domain. | 0.953 |
SCB18044.1 | SCB40937.1 | GA0061102_100597 | GA0061102_103322 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.504 |
SCB18044.1 | SCB42292.1 | GA0061102_100597 | GA0061102_103660 | Hypothetical protein. | Two-component system, cell cycle sensor histidine kinase and response regulator CckA. | 0.856 |
SCB18044.1 | SCB43476.1 | GA0061102_100597 | GA0061102_104035 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.955 |
SCB18044.1 | SCB48327.1 | GA0061102_100597 | GA0061102_10652 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.776 |
SCB24200.1 | SCB08284.1 | GA0061102_101022 | GA0061102_1001195 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.953 |
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