STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB40853.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (395 aa)    
Predicted Functional Partners:
SCB40846.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.970
SCB11507.1
Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.854
SCB12774.1
Putative ABC transport system permease protein.
 
 
 0.854
SCB48473.1
Outer membrane protein, multidrug efflux system.
 
 0.793
SCB12767.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.785
SCB29247.1
Outer membrane protein, adhesin transport system.
  
 0.740
SCB12019.1
Outer membrane protein TolC.
  
  0.731
SCB43226.1
Nodulation-related efflux transporter NolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.720
SCB27065.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
  
  0.688
SCB27941.1
Multidrug efflux pump.
  
  0.674
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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