Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB16289.1 | SCB17096.1 | GA0061102_1004145 | GA0061102_1004290 | Molybdenum cofactor synthesis domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.940 |
SCB16289.1 | SCB41959.1 | GA0061102_1004145 | GA0061102_103561 | Molybdenum cofactor synthesis domain-containing protein. | Hypothetical protein. | 0.539 |
SCB16289.1 | nadD | GA0061102_1004145 | GA0061102_100853 | Molybdenum cofactor synthesis domain-containing protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.800 |
SCB16289.1 | pncB | GA0061102_1004145 | GA0061102_1001436 | Molybdenum cofactor synthesis domain-containing protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.728 |
SCB17096.1 | SCB16289.1 | GA0061102_1004290 | GA0061102_1004145 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Molybdenum cofactor synthesis domain-containing protein. | 0.940 |
SCB17096.1 | SCB41959.1 | GA0061102_1004290 | GA0061102_103561 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Hypothetical protein. | 0.564 |
SCB17096.1 | nadD | GA0061102_1004290 | GA0061102_100853 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.834 |
SCB17096.1 | pncB | GA0061102_1004290 | GA0061102_1001436 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.731 |
SCB41959.1 | SCB16289.1 | GA0061102_103561 | GA0061102_1004145 | Hypothetical protein. | Molybdenum cofactor synthesis domain-containing protein. | 0.539 |
SCB41959.1 | SCB17096.1 | GA0061102_103561 | GA0061102_1004290 | Hypothetical protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.564 |
SCB41959.1 | guaB | GA0061102_103561 | GA0061102_102016 | Hypothetical protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.539 |
SCB41959.1 | nadD | GA0061102_103561 | GA0061102_100853 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.569 |
SCB41959.1 | parE | GA0061102_103561 | GA0061102_103562 | Hypothetical protein. | Topoisomerase-4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.559 |
SCB41959.1 | pfp | GA0061102_103561 | GA0061102_10318 | Hypothetical protein. | Pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.540 |
SCB41959.1 | pncB | GA0061102_103561 | GA0061102_1001436 | Hypothetical protein. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.530 |
SCB41959.1 | pyrF | GA0061102_103561 | GA0061102_1001271 | Hypothetical protein. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.544 |
SCB41959.1 | thrS | GA0061102_103561 | GA0061102_103571 | Hypothetical protein. | Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.537 |
SCB41959.1 | upp | GA0061102_103561 | GA0061102_1001407 | Hypothetical protein. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.530 |
guaB | SCB41959.1 | GA0061102_102016 | GA0061102_103561 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Hypothetical protein. | 0.539 |
guaB | pyrF | GA0061102_102016 | GA0061102_1001271 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.531 |
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