Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB08176.1 | SCB41995.1 | GA0061102_1001180 | GA0061102_103570 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Putative hemolysin. | 0.688 |
SCB16664.1 | SCB41995.1 | GA0061102_1004211 | GA0061102_103570 | Uncharacterized membrane protein. | Putative hemolysin. | 0.403 |
SCB41995.1 | SCB08176.1 | GA0061102_103570 | GA0061102_1001180 | Putative hemolysin. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.688 |
SCB41995.1 | SCB16664.1 | GA0061102_103570 | GA0061102_1004211 | Putative hemolysin. | Uncharacterized membrane protein. | 0.403 |
SCB41995.1 | SCB42003.1 | GA0061102_103570 | GA0061102_103572 | Putative hemolysin. | Uncharacterized conserved protein, DUF1697 family. | 0.431 |
SCB41995.1 | thrS | GA0061102_103570 | GA0061102_103571 | Putative hemolysin. | Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.554 |
SCB42003.1 | SCB41995.1 | GA0061102_103572 | GA0061102_103570 | Uncharacterized conserved protein, DUF1697 family. | Putative hemolysin. | 0.431 |
SCB42003.1 | thrS | GA0061102_103572 | GA0061102_103571 | Uncharacterized conserved protein, DUF1697 family. | Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.520 |
thrS | SCB41995.1 | GA0061102_103571 | GA0061102_103570 | Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | Putative hemolysin. | 0.554 |
thrS | SCB42003.1 | GA0061102_103571 | GA0061102_103572 | Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | Uncharacterized conserved protein, DUF1697 family. | 0.520 |