STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB43124.1Serine/threonine protein phosphatase 1. (248 aa)    
Predicted Functional Partners:
SCB33100.1
Ankyrin repeat-containing protein.
  
 
 0.778
SCB44659.1
Ankyrin repeat.
    
 0.746
SCB48828.1
Hypothetical protein.
    
 0.746
SCB38593.1
PAS domain S-box-containing protein.
  
  
 0.699
SCB43476.1
PAS domain S-box-containing protein.
     
 0.689
SCB33662.1
Adenylate cyclase.
    
 0.685
SCB10909.1
Adenylate cyclase.
    
  0.664
SCB50032.1
Tetratricopeptide repeat-containing protein.
    
  0.664
SCB42292.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
     
 0.663
SCB48327.1
Methyl-accepting chemotaxis protein.
   
 
 0.630
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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