STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB43960.1Putative spermidine/putrescine transport system permease protein. (285 aa)    
Predicted Functional Partners:
SCB43964.1
Putative spermidine/putrescine transport system permease protein.
 
  0.989
SCB43967.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.966
SCB36067.1
Putative spermidine/putrescine transport system permease protein.
 
  0.951
SCB37907.1
Putative spermidine/putrescine transport system permease protein.
 
  0.925
SCB43956.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
  0.916
SCB47551.1
Putative spermidine/putrescine transport system permease protein.
 
  0.893
SCB33050.1
Putrescine transport system permease protein.
 
  0.885
SCB26126.1
Spermidine/putrescine transport system permease protein.
 
  0.882
SCB12591.1
Spermidine/putrescine transport system permease protein.
 
  0.879
SCB12636.1
Spermidine/putrescine transport system permease protein.
 
  0.877
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.