Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB11646.1 | SCB43982.1 | GA0061102_1002128 | GA0061102_104222 | Polar amino acid transport system permease protein. | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | 0.599 |
SCB11646.1 | SCB43986.1 | GA0061102_1002128 | GA0061102_104223 | Polar amino acid transport system permease protein. | Polar amino acid transport system permease protein. | 0.670 |
SCB11646.1 | SCB43990.1 | GA0061102_1002128 | GA0061102_104224 | Polar amino acid transport system permease protein. | Polar amino acid transport system permease protein. | 0.617 |
SCB11646.1 | SCB43994.1 | GA0061102_1002128 | GA0061102_104225 | Polar amino acid transport system permease protein. | Amino acid ABC transporter ATP-binding protein, PAAT family. | 0.851 |
SCB11646.1 | SCB47066.1 | GA0061102_1002128 | GA0061102_10575 | Polar amino acid transport system permease protein. | Polar amino acid transport system permease protein. | 0.647 |
SCB11646.1 | SCB47071.1 | GA0061102_1002128 | GA0061102_10576 | Polar amino acid transport system permease protein. | Polar amino acid transport system permease protein. | 0.531 |
SCB11646.1 | SCB49515.1 | GA0061102_1002128 | GA0061102_10757 | Polar amino acid transport system permease protein. | Polar amino acid transport system permease protein. | 0.787 |
SCB38593.1 | SCB43476.1 | GA0061102_102857 | GA0061102_104035 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SCB38593.1 | SCB43982.1 | GA0061102_102857 | GA0061102_104222 | PAS domain S-box-containing protein. | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | 0.723 |
SCB38593.1 | SCB44238.1 | GA0061102_102857 | GA0061102_104319 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.995 |
SCB43476.1 | SCB38593.1 | GA0061102_104035 | GA0061102_102857 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SCB43476.1 | SCB43982.1 | GA0061102_104035 | GA0061102_104222 | PAS domain S-box-containing protein. | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | 0.679 |
SCB43476.1 | SCB44238.1 | GA0061102_104035 | GA0061102_104319 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SCB43982.1 | SCB11646.1 | GA0061102_104222 | GA0061102_1002128 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Polar amino acid transport system permease protein. | 0.599 |
SCB43982.1 | SCB38593.1 | GA0061102_104222 | GA0061102_102857 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | PAS domain S-box-containing protein. | 0.723 |
SCB43982.1 | SCB43476.1 | GA0061102_104222 | GA0061102_104035 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | PAS domain S-box-containing protein. | 0.679 |
SCB43982.1 | SCB43986.1 | GA0061102_104222 | GA0061102_104223 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Polar amino acid transport system permease protein. | 0.991 |
SCB43982.1 | SCB43990.1 | GA0061102_104222 | GA0061102_104224 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Polar amino acid transport system permease protein. | 0.994 |
SCB43982.1 | SCB43994.1 | GA0061102_104222 | GA0061102_104225 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter ATP-binding protein, PAAT family. | 0.988 |
SCB43982.1 | SCB44238.1 | GA0061102_104222 | GA0061102_104319 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.664 |
page 1 of 4