Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB43931.1 | SCB43935.1 | GA0061102_10428 | GA0061102_10429 | DNA-binding transcriptional regulator, GntR family. | Amino acid synthesis. | 0.744 |
SCB43931.1 | SCB43937.1 | GA0061102_10428 | GA0061102_104210 | DNA-binding transcriptional regulator, GntR family. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.689 |
SCB43931.1 | SCB43941.1 | GA0061102_10428 | GA0061102_104211 | DNA-binding transcriptional regulator, GntR family. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.625 |
SCB43931.1 | SCB43945.1 | GA0061102_10428 | GA0061102_104212 | DNA-binding transcriptional regulator, GntR family. | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | 0.709 |
SCB43931.1 | SCB43949.1 | GA0061102_10428 | GA0061102_104213 | DNA-binding transcriptional regulator, GntR family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.618 |
SCB43931.1 | SCB43952.1 | GA0061102_10428 | GA0061102_104214 | DNA-binding transcriptional regulator, GntR family. | NIPSNAP protein. | 0.521 |
SCB43931.1 | SCB43956.1 | GA0061102_10428 | GA0061102_104215 | DNA-binding transcriptional regulator, GntR family. | Putative spermidine/putrescine transport system substrate-binding protein. | 0.566 |
SCB43931.1 | SCB43960.1 | GA0061102_10428 | GA0061102_104216 | DNA-binding transcriptional regulator, GntR family. | Putative spermidine/putrescine transport system permease protein. | 0.422 |
SCB43931.1 | SCB43964.1 | GA0061102_10428 | GA0061102_104217 | DNA-binding transcriptional regulator, GntR family. | Putative spermidine/putrescine transport system permease protein. | 0.435 |
SCB43935.1 | SCB43931.1 | GA0061102_10429 | GA0061102_10428 | Amino acid synthesis. | DNA-binding transcriptional regulator, GntR family. | 0.744 |
SCB43935.1 | SCB43937.1 | GA0061102_10429 | GA0061102_104210 | Amino acid synthesis. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.945 |
SCB43935.1 | SCB43941.1 | GA0061102_10429 | GA0061102_104211 | Amino acid synthesis. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.929 |
SCB43935.1 | SCB43945.1 | GA0061102_10429 | GA0061102_104212 | Amino acid synthesis. | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | 0.943 |
SCB43935.1 | SCB43949.1 | GA0061102_10429 | GA0061102_104213 | Amino acid synthesis. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.887 |
SCB43935.1 | SCB43952.1 | GA0061102_10429 | GA0061102_104214 | Amino acid synthesis. | NIPSNAP protein. | 0.789 |
SCB43935.1 | SCB43956.1 | GA0061102_10429 | GA0061102_104215 | Amino acid synthesis. | Putative spermidine/putrescine transport system substrate-binding protein. | 0.879 |
SCB43935.1 | SCB43960.1 | GA0061102_10429 | GA0061102_104216 | Amino acid synthesis. | Putative spermidine/putrescine transport system permease protein. | 0.550 |
SCB43935.1 | SCB43964.1 | GA0061102_10429 | GA0061102_104217 | Amino acid synthesis. | Putative spermidine/putrescine transport system permease protein. | 0.654 |
SCB43935.1 | SCB43967.1 | GA0061102_10429 | GA0061102_104218 | Amino acid synthesis. | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.541 |
SCB43937.1 | SCB43931.1 | GA0061102_104210 | GA0061102_10428 | Pimeloyl-ACP methyl ester carboxylesterase. | DNA-binding transcriptional regulator, GntR family. | 0.689 |
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