STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB47824.1Pilus assembly protein Flp/PilA. (60 aa)    
Predicted Functional Partners:
SCB09781.1
Pilus assembly protein CpaE.
 
  
 0.927
SCB09804.1
Pilus assembly protein CpaB.
 
  
 0.922
SCB09810.1
Prepilin peptidase CpaA.
 
  
 0.865
SCB09766.1
Tight adherence protein B.
 
  
 0.786
SCB09758.1
Tight adherence protein C.
 
  
 0.723
SCB09795.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.717
SCB09827.1
Pilus formation protein N terminal region.
 
  
 0.696
SCB09835.1
Flp pilus assembly protein TadG.
 
  
 0.652
SCB09772.1
Pilus assembly protein CpaF.
 
  
 0.629
SCB09844.1
Flp pilus assembly protein TadG.
 
  
 0.579
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.