Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB11367.1 | SCB11388.1 | GA0061102_100291 | GA0061102_100294 | Urea transport system ATP-binding protein. | Urea transport system substrate-binding protein. | 0.997 |
SCB11367.1 | SCB11396.1 | GA0061102_100291 | GA0061102_100295 | Urea transport system ATP-binding protein. | Signal transduction histidine kinase. | 0.619 |
SCB11367.1 | ureA | GA0061102_100291 | GA0061102_106228 | Urea transport system ATP-binding protein. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.490 |
SCB11367.1 | ureB | GA0061102_100291 | GA0061102_106230 | Urea transport system ATP-binding protein. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.549 |
SCB11367.1 | ureC | GA0061102_100291 | GA0061102_106233 | Urea transport system ATP-binding protein. | Urease subunit alpha. | 0.540 |
SCB11367.1 | ureD | GA0061102_100291 | GA0061102_106227 | Urea transport system ATP-binding protein. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.609 |
SCB11367.1 | ureE | GA0061102_100291 | GA0061102_10333 | Urea transport system ATP-binding protein. | Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.663 |
SCB11367.1 | ureF | GA0061102_100291 | GA0061102_10334 | Urea transport system ATP-binding protein. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.623 |
SCB11367.1 | ureG | GA0061102_100291 | GA0061102_10335 | Urea transport system ATP-binding protein. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.519 |
SCB11388.1 | SCB11367.1 | GA0061102_100294 | GA0061102_100291 | Urea transport system substrate-binding protein. | Urea transport system ATP-binding protein. | 0.997 |
SCB11388.1 | SCB11396.1 | GA0061102_100294 | GA0061102_100295 | Urea transport system substrate-binding protein. | Signal transduction histidine kinase. | 0.692 |
SCB11388.1 | ureA | GA0061102_100294 | GA0061102_106228 | Urea transport system substrate-binding protein. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.513 |
SCB11388.1 | ureB | GA0061102_100294 | GA0061102_106230 | Urea transport system substrate-binding protein. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.563 |
SCB11388.1 | ureC | GA0061102_100294 | GA0061102_106233 | Urea transport system substrate-binding protein. | Urease subunit alpha. | 0.584 |
SCB11388.1 | ureD | GA0061102_100294 | GA0061102_106227 | Urea transport system substrate-binding protein. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.666 |
SCB11388.1 | ureE | GA0061102_100294 | GA0061102_10333 | Urea transport system substrate-binding protein. | Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.719 |
SCB11388.1 | ureF | GA0061102_100294 | GA0061102_10334 | Urea transport system substrate-binding protein. | Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.648 |
SCB11388.1 | ureG | GA0061102_100294 | GA0061102_10335 | Urea transport system substrate-binding protein. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.534 |
SCB11396.1 | SCB11367.1 | GA0061102_100295 | GA0061102_100291 | Signal transduction histidine kinase. | Urea transport system ATP-binding protein. | 0.619 |
SCB11396.1 | SCB11388.1 | GA0061102_100295 | GA0061102_100294 | Signal transduction histidine kinase. | Urea transport system substrate-binding protein. | 0.692 |
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