STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppB-1Oligopeptide ABC transporter, permease protein; Possible lipoprotein (SpLip). (306 aa)    
Predicted Functional Partners:
oppC-1
Oligopeptide transport system permease protein.
 0.999
oppD
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
oppF
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.997
oppA-1
Oligopeptide transport system substrate-binding protein; Probable lipoprotein (SpLip).
 0.996
oppA-2
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.
 
 0.996
oppC-2
Oligopeptide ABC transporter, permease protein.
 
   
 0.890
BDU_414
Sensory transduction histidine kinase.
     
 0.514
fruA-1
PTS system, fructose-specific IIABC component.
     
 0.512
fruA-2
PTS system, fructose-specific IIABC component.
     
 0.512
oppB-2
Oligopeptide ABC transporter, permease protein.
  
     0.459
Your Current Organism:
Borrelia duttonii
NCBI taxonomy Id: 412419
Other names: B. duttonii Ly, Borrelia duttonii Ly, Borrelia duttonii str. Ly, Borrelia duttonii strain Ly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.