Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BDU_693Uncharacterized conserved protein; Possible lipoprotein (SpLip). (150 aa)    
Predicted Functional Partners:
BDU_514
P-512 protein; RGD and LEUCINE_ZIPPER motifs (Prosite).
 
    0.791
BDU_851
Uncharacterized conserved protein.
 
     0.782
BDU_746
Uncharacterized conserved protein; Amidation motif (Prosite).
  
     0.764
napA_2
Neutrophil activating protein; Belongs to the Dps family.
       0.746
BDU_400
Uncharacterized conserved protein.
 
     0.724
BDU_76
Uncharacterized conserved protein.
  
     0.721
BDU_169
Uncharacterized conserved protein; 2 amidation motifs and one RGD (Prosite).
  
     0.717
BDU_324
Uncharacterized conserved protein; Probable lipoprotein (SpLip).
 
    0.714
BDU_62
Uncharacterized conserved protein.
  
     0.710
BDU_593
Uncharacterized conserved protein.
  
    0.672
Your Current Organism:
Borrelia duttonii
NCBI taxonomy Id: 412419
Other names: B. duttonii Ly, Borrelia duttonii Ly, Borrelia duttonii str. Ly, Borrelia duttonii strain Ly
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