STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR75024.1NitT/TauT family transport system substrate-binding protein; Non-canonical start codon; manually curated. (298 aa)    
Predicted Functional Partners:
SDR75100.1
NitT/TauT family transport system permease protein.
  
 0.969
SDR75063.1
NitT/TauT family transport system ATP-binding protein.
  
 0.959
SDR95975.1
NitT/TauT family transport system ATP-binding protein.
  
 0.874
SDR96023.1
NitT/TauT family transport system permease protein.
 
  
 0.766
SDR74991.1
Arylsulfatase A.
 
    0.724
SDR95914.1
NitT/TauT family transport system permease protein.
 
  
 0.650
SDR75136.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.514
SDS62666.1
Protein of unknown function.
  
  
 0.458
SDR88904.1
Probable F420-dependent oxidoreductase, Rv1855c family.
 
  
 0.420
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.