Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR75689.1 | SDR75728.1 | SAMN04489834_0153 | SAMN04489834_0154 | LssY C-terminus. | Iron complex transport system ATP-binding protein. | 0.632 |
SDR75689.1 | SDR75753.1 | SAMN04489834_0153 | SAMN04489834_0155 | LssY C-terminus. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.638 |
SDR75689.1 | SDR75779.1 | SAMN04489834_0153 | SAMN04489834_0156 | LssY C-terminus. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.634 |
SDR75689.1 | SDR75812.1 | SAMN04489834_0153 | SAMN04489834_0157 | LssY C-terminus. | Iron complex transport system substrate-binding protein. | 0.592 |
SDR75728.1 | SDR75689.1 | SAMN04489834_0154 | SAMN04489834_0153 | Iron complex transport system ATP-binding protein. | LssY C-terminus. | 0.632 |
SDR75728.1 | SDR75753.1 | SAMN04489834_0154 | SAMN04489834_0155 | Iron complex transport system ATP-binding protein. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.968 |
SDR75728.1 | SDR75779.1 | SAMN04489834_0154 | SAMN04489834_0156 | Iron complex transport system ATP-binding protein. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.947 |
SDR75728.1 | SDR75812.1 | SAMN04489834_0154 | SAMN04489834_0157 | Iron complex transport system ATP-binding protein. | Iron complex transport system substrate-binding protein. | 0.934 |
SDR75753.1 | SDR75689.1 | SAMN04489834_0155 | SAMN04489834_0153 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | LssY C-terminus. | 0.638 |
SDR75753.1 | SDR75728.1 | SAMN04489834_0155 | SAMN04489834_0154 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein. | 0.968 |
SDR75753.1 | SDR75779.1 | SAMN04489834_0155 | SAMN04489834_0156 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.932 |
SDR75753.1 | SDR75812.1 | SAMN04489834_0155 | SAMN04489834_0157 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system substrate-binding protein. | 0.994 |
SDR75753.1 | SDR95526.1 | SAMN04489834_0155 | SAMN04489834_0588 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein. | 0.423 |
SDR75753.1 | SDS32918.1 | SAMN04489834_0155 | SAMN04489834_1281 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein. | 0.570 |
SDR75753.1 | hmuV | SAMN04489834_0155 | SAMN04489834_0715 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. | 0.447 |
SDR75779.1 | SDR75689.1 | SAMN04489834_0156 | SAMN04489834_0153 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | LssY C-terminus. | 0.634 |
SDR75779.1 | SDR75728.1 | SAMN04489834_0156 | SAMN04489834_0154 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein. | 0.947 |
SDR75779.1 | SDR75753.1 | SAMN04489834_0156 | SAMN04489834_0155 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.932 |
SDR75779.1 | SDR75812.1 | SAMN04489834_0156 | SAMN04489834_0157 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system substrate-binding protein. | 0.945 |
SDR75779.1 | SDR95526.1 | SAMN04489834_0156 | SAMN04489834_0588 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein. | 0.883 |
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