Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR80689.1 | SDR80740.1 | SAMN04489834_0285 | SAMN04489834_0286 | L-threonine ammonia-lyase. | NAD(P) transhydrogenase subunit alpha. | 0.441 |
SDR80689.1 | SDR80790.1 | SAMN04489834_0285 | SAMN04489834_0287 | L-threonine ammonia-lyase. | NAD(P) transhydrogenase subunit alpha. | 0.441 |
SDR80689.1 | SDR80834.1 | SAMN04489834_0285 | SAMN04489834_0288 | L-threonine ammonia-lyase. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.442 |
SDR80740.1 | SDR80689.1 | SAMN04489834_0286 | SAMN04489834_0285 | NAD(P) transhydrogenase subunit alpha. | L-threonine ammonia-lyase. | 0.441 |
SDR80740.1 | SDR80790.1 | SAMN04489834_0286 | SAMN04489834_0287 | NAD(P) transhydrogenase subunit alpha. | NAD(P) transhydrogenase subunit alpha. | 0.999 |
SDR80740.1 | SDR80834.1 | SAMN04489834_0286 | SAMN04489834_0288 | NAD(P) transhydrogenase subunit alpha. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.999 |
SDR80740.1 | SDR80860.1 | SAMN04489834_0286 | SAMN04489834_0289 | NAD(P) transhydrogenase subunit alpha. | Hypothetical protein. | 0.439 |
SDR80740.1 | SDR80904.1 | SAMN04489834_0286 | SAMN04489834_0290 | NAD(P) transhydrogenase subunit alpha. | Hypothetical protein. | 0.439 |
SDR80740.1 | pheT | SAMN04489834_0286 | SAMN04489834_2641 | NAD(P) transhydrogenase subunit alpha. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.444 |
SDR80790.1 | SDR80689.1 | SAMN04489834_0287 | SAMN04489834_0285 | NAD(P) transhydrogenase subunit alpha. | L-threonine ammonia-lyase. | 0.441 |
SDR80790.1 | SDR80740.1 | SAMN04489834_0287 | SAMN04489834_0286 | NAD(P) transhydrogenase subunit alpha. | NAD(P) transhydrogenase subunit alpha. | 0.999 |
SDR80790.1 | SDR80834.1 | SAMN04489834_0287 | SAMN04489834_0288 | NAD(P) transhydrogenase subunit alpha. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.999 |
SDR80790.1 | SDR80860.1 | SAMN04489834_0287 | SAMN04489834_0289 | NAD(P) transhydrogenase subunit alpha. | Hypothetical protein. | 0.436 |
SDR80790.1 | SDR80904.1 | SAMN04489834_0287 | SAMN04489834_0290 | NAD(P) transhydrogenase subunit alpha. | Hypothetical protein. | 0.439 |
SDR80790.1 | SDR90818.1 | SAMN04489834_0287 | SAMN04489834_0495 | NAD(P) transhydrogenase subunit alpha. | Haloacid dehalogenase-like hydrolase. | 0.505 |
SDR80790.1 | SDS23556.1 | SAMN04489834_0287 | SAMN04489834_1106 | NAD(P) transhydrogenase subunit alpha. | Transcriptional regulator, DeoR family. | 0.502 |
SDR80790.1 | pheT | SAMN04489834_0287 | SAMN04489834_2641 | NAD(P) transhydrogenase subunit alpha. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.444 |
SDR80834.1 | SDR80689.1 | SAMN04489834_0288 | SAMN04489834_0285 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | L-threonine ammonia-lyase. | 0.442 |
SDR80834.1 | SDR80740.1 | SAMN04489834_0288 | SAMN04489834_0286 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD(P) transhydrogenase subunit alpha. | 0.999 |
SDR80834.1 | SDR80790.1 | SAMN04489834_0288 | SAMN04489834_0287 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD(P) transhydrogenase subunit alpha. | 0.999 |
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