STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR81278.1Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). (475 aa)    
Predicted Functional Partners:
SDR81216.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.995
SDR81192.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 0.990
SDT04084.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.990
SDS77397.1
Dihydrolipoamide dehydrogenase.
 0.981
SDT04136.1
Pyruvate dehydrogenase E1 component alpha subunit.
 0.977
SDS31197.1
2-oxoglutarate dehydrogenase E1 component.
 
0.968
SDS26704.1
Dihydrolipoamide dehydrogenase.
 0.931
SDT21558.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.844
SDR86715.1
Lipoate-protein ligase A.
 
 0.819
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.800
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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