Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR79485.1 | SDR87741.1 | SAMN04489834_0256 | SAMN04489834_0430 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.643 |
| SDR79485.1 | SDS62358.1 | SAMN04489834_0256 | SAMN04489834_1821 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein of unknown function. | 0.407 |
| SDR79485.1 | SDS72369.1 | SAMN04489834_0256 | SAMN04489834_2019 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Membrane carboxypeptidase (penicillin-binding protein). | 0.442 |
| SDR79485.1 | SDS77158.1 | SAMN04489834_0256 | SAMN04489834_2116 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Protein of unknown function. | 0.615 |
| SDR79485.1 | SDS89718.1 | SAMN04489834_0256 | SAMN04489834_2387 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Cell division protein FtsI (penicillin-binding protein 3). | 0.718 |
| SDR79485.1 | SDT27397.1 | SAMN04489834_0256 | SAMN04489834_3276 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Membrane carboxypeptidase (penicillin-binding protein). | 0.402 |
| SDR79485.1 | recF | SAMN04489834_0256 | SAMN04489834_0254 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.980 |
| SDR87741.1 | SDR79485.1 | SAMN04489834_0430 | SAMN04489834_0256 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.643 |
| SDR87741.1 | SDS62358.1 | SAMN04489834_0430 | SAMN04489834_1821 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Protein of unknown function. | 0.581 |
| SDR87741.1 | SDS72369.1 | SAMN04489834_0430 | SAMN04489834_2019 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Membrane carboxypeptidase (penicillin-binding protein). | 0.559 |
| SDR87741.1 | SDS77102.1 | SAMN04489834_0430 | SAMN04489834_2115 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Hypothetical protein. | 0.599 |
| SDR87741.1 | SDS77158.1 | SAMN04489834_0430 | SAMN04489834_2116 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Protein of unknown function. | 0.575 |
| SDR87741.1 | SDS89718.1 | SAMN04489834_0430 | SAMN04489834_2387 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Cell division protein FtsI (penicillin-binding protein 3). | 0.522 |
| SDR87741.1 | SDT27178.1 | SAMN04489834_0430 | SAMN04489834_3270 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Tight adherence protein B. | 0.527 |
| SDR87741.1 | SDT27397.1 | SAMN04489834_0430 | SAMN04489834_3276 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Membrane carboxypeptidase (penicillin-binding protein). | 0.563 |
| SDR87741.1 | recF | SAMN04489834_0430 | SAMN04489834_0254 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.526 |
| SDR87741.1 | thrB | SAMN04489834_0430 | SAMN04489834_1324 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.611 |
| SDS62358.1 | SDR79485.1 | SAMN04489834_1821 | SAMN04489834_0256 | Protein of unknown function. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.407 |
| SDS62358.1 | SDR87741.1 | SAMN04489834_1821 | SAMN04489834_0430 | Protein of unknown function. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.581 |
| SDS62358.1 | SDT27178.1 | SAMN04489834_1821 | SAMN04489834_3270 | Protein of unknown function. | Tight adherence protein B. | 0.740 |
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