STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR95480.1LPPG:FO 2-phospho-L-lactate transferase. (371 aa)    
Predicted Functional Partners:
SDR95167.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
  
 0.972
fbiD
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.936
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
  
 0.878
SDS93850.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
 
   
 0.877
SDS68996.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
  
  
 0.823
SDR95651.1
Iron complex transport system substrate-binding protein.
       0.783
SDR95590.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.782
SDR95526.1
Iron complex transport system ATP-binding protein.
       0.778
SDS06754.1
Probable F420-dependent oxidoreductase, Rv3520c family.
 
   
 0.765
SDT24621.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
 
   
 0.757
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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