Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS01763.1 | SDS04557.1 | SAMN04489834_0706 | SAMN04489834_0757 | Imidazolonepropionase. | Histidine ammonia-lyase. | 0.673 |
SDS01763.1 | hutU | SAMN04489834_0706 | SAMN04489834_0753 | Imidazolonepropionase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.673 |
SDS03839.1 | SDS04557.1 | SAMN04489834_0743 | SAMN04489834_0757 | Formiminoglutamase; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.813 |
SDS03839.1 | hutI | SAMN04489834_0743 | SAMN04489834_0752 | Formiminoglutamase; Belongs to the arginase family. | Imidazolonepropionase. | 0.870 |
SDS03839.1 | hutU | SAMN04489834_0743 | SAMN04489834_0753 | Formiminoglutamase; Belongs to the arginase family. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.735 |
SDS04557.1 | SDS01763.1 | SAMN04489834_0757 | SAMN04489834_0706 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.673 |
SDS04557.1 | SDS03839.1 | SAMN04489834_0757 | SAMN04489834_0743 | Histidine ammonia-lyase. | Formiminoglutamase; Belongs to the arginase family. | 0.813 |
SDS04557.1 | SDS04604.1 | SAMN04489834_0757 | SAMN04489834_0758 | Histidine ammonia-lyase. | Hypothetical protein. | 0.554 |
SDS04557.1 | SDS23998.1 | SAMN04489834_0757 | SAMN04489834_1115 | Histidine ammonia-lyase. | Hexosaminidase. | 0.617 |
SDS04557.1 | SDS33541.1 | SAMN04489834_0757 | SAMN04489834_1293 | Histidine ammonia-lyase. | Arginase; Belongs to the arginase family. | 0.479 |
SDS04557.1 | SDS80291.1 | SAMN04489834_0757 | SAMN04489834_2185 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.673 |
SDS04557.1 | SDS97886.1 | SAMN04489834_0757 | SAMN04489834_2563 | Histidine ammonia-lyase. | Hexosaminidase. | 0.617 |
SDS04557.1 | gcvP | SAMN04489834_0757 | SAMN04489834_2758 | Histidine ammonia-lyase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.629 |
SDS04557.1 | hutI | SAMN04489834_0757 | SAMN04489834_0752 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.979 |
SDS04557.1 | hutU | SAMN04489834_0757 | SAMN04489834_0753 | Histidine ammonia-lyase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.999 |
SDS04604.1 | SDS04557.1 | SAMN04489834_0758 | SAMN04489834_0757 | Hypothetical protein. | Histidine ammonia-lyase. | 0.554 |
SDS23998.1 | SDS04557.1 | SAMN04489834_1115 | SAMN04489834_0757 | Hexosaminidase. | Histidine ammonia-lyase. | 0.617 |
SDS33541.1 | SDS04557.1 | SAMN04489834_1293 | SAMN04489834_0757 | Arginase; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.479 |
SDS80291.1 | SDS04557.1 | SAMN04489834_2185 | SAMN04489834_0757 | Imidazolonepropionase. | Histidine ammonia-lyase. | 0.673 |
SDS80291.1 | hutU | SAMN04489834_2185 | SAMN04489834_0753 | Imidazolonepropionase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.673 |
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