STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS15081.1FHA domain-containing protein. (317 aa)    
Predicted Functional Partners:
SDS14948.1
Protein of unknown function DUF58.
 
    0.875
SDS14831.1
Hypothetical protein.
 
     0.874
SDS15014.1
Transglutaminase-like superfamily protein.
 
    0.869
SDS15130.1
Protein phosphatase.
  
    0.785
SDS15194.1
Hypothetical protein.
       0.773
SDT05085.1
CAAX protease self-immunity.
  
     0.680
SDS90692.1
Heat shock protein Hsp15.
  
    0.664
SDS15253.1
Hypothetical protein.
       0.584
SDS14894.1
MoxR-like ATPase.
  
    0.576
SDS14760.1
Serine/threonine protein kinase.
 
    0.536
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.