STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS19421.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (259 aa)    
Predicted Functional Partners:
SDS13328.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.978
SDS19545.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.975
SDS19600.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.966
SDS96499.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.952
SDS19474.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  
0.901
SDS19333.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
  
 0.862
SDS13287.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.772
SDS13211.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
  
 0.770
SDR71622.1
ABC-2 type transport system ATP-binding protein.
    
0.712
SDS96459.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.618
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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