STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS20734.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (280 aa)    
Predicted Functional Partners:
SDS20685.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.997
SDS20634.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.996
SDT22950.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 0.993
SDT28756.1
Multiple sugar transport system permease protein.
 
 0.880
SDS23853.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   0.878
SDT12380.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   0.877
SDR96865.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   0.874
SDS97971.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.874
SDS23072.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.873
SDR83096.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.871
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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