Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR71020.1 | SDS14434.1 | SAMN04489834_0017 | SAMN04489834_0942 | Predicted arabinose efflux permease, MFS family. | SprT-like family protein. | 0.601 |
SDR71020.1 | SDS22783.1 | SAMN04489834_0017 | SAMN04489834_1092 | Predicted arabinose efflux permease, MFS family. | Diamine N-acetyltransferase. | 0.723 |
SDR71020.1 | SDS28932.1 | SAMN04489834_0017 | SAMN04489834_1206 | Predicted arabinose efflux permease, MFS family. | O-antigen ligase. | 0.495 |
SDR71020.1 | SDS29432.1 | SAMN04489834_0017 | SAMN04489834_1215 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.623 |
SDR71020.1 | SDS35033.1 | SAMN04489834_0017 | SAMN04489834_1320 | Predicted arabinose efflux permease, MFS family. | Protein of unknown function. | 0.514 |
SDR71020.1 | SDS62358.1 | SAMN04489834_0017 | SAMN04489834_1821 | Predicted arabinose efflux permease, MFS family. | Protein of unknown function. | 0.580 |
SDR71020.1 | SDT03675.1 | SAMN04489834_0017 | SAMN04489834_2688 | Predicted arabinose efflux permease, MFS family. | Probable phosphoglycerate mutase. | 0.585 |
SDR71020.1 | SDT21897.1 | SAMN04489834_0017 | SAMN04489834_3117 | Predicted arabinose efflux permease, MFS family. | LytR cell envelope-related transcriptional attenuator. | 0.687 |
SDR72088.1 | SDS22783.1 | SAMN04489834_0051 | SAMN04489834_1092 | Putrescine oxidase. | Diamine N-acetyltransferase. | 0.901 |
SDS14434.1 | SDR71020.1 | SAMN04489834_0942 | SAMN04489834_0017 | SprT-like family protein. | Predicted arabinose efflux permease, MFS family. | 0.601 |
SDS14434.1 | SDS22783.1 | SAMN04489834_0942 | SAMN04489834_1092 | SprT-like family protein. | Diamine N-acetyltransferase. | 0.723 |
SDS14434.1 | SDS28932.1 | SAMN04489834_0942 | SAMN04489834_1206 | SprT-like family protein. | O-antigen ligase. | 0.710 |
SDS14434.1 | SDS29432.1 | SAMN04489834_0942 | SAMN04489834_1215 | SprT-like family protein. | Hypothetical protein. | 0.682 |
SDS14434.1 | SDS35033.1 | SAMN04489834_0942 | SAMN04489834_1320 | SprT-like family protein. | Protein of unknown function. | 0.497 |
SDS14434.1 | SDS62358.1 | SAMN04489834_0942 | SAMN04489834_1821 | SprT-like family protein. | Protein of unknown function. | 0.650 |
SDS14434.1 | SDT03675.1 | SAMN04489834_0942 | SAMN04489834_2688 | SprT-like family protein. | Probable phosphoglycerate mutase. | 0.487 |
SDS14434.1 | SDT21897.1 | SAMN04489834_0942 | SAMN04489834_3117 | SprT-like family protein. | LytR cell envelope-related transcriptional attenuator. | 0.470 |
SDS22731.1 | SDS22783.1 | SAMN04489834_1091 | SAMN04489834_1092 | Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain. | Diamine N-acetyltransferase. | 0.784 |
SDS22783.1 | SDR71020.1 | SAMN04489834_1092 | SAMN04489834_0017 | Diamine N-acetyltransferase. | Predicted arabinose efflux permease, MFS family. | 0.723 |
SDS22783.1 | SDR72088.1 | SAMN04489834_1092 | SAMN04489834_0051 | Diamine N-acetyltransferase. | Putrescine oxidase. | 0.901 |
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