STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS22783.1Diamine N-acetyltransferase. (151 aa)    
Predicted Functional Partners:
SDR72088.1
Putrescine oxidase.
    
  0.901
SDS22731.1
Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain.
       0.784
SDS29432.1
Hypothetical protein.
  
     0.727
SDR71020.1
Predicted arabinose efflux permease, MFS family.
 
     0.723
SDS14434.1
SprT-like family protein.
 
     0.723
SDT03675.1
Probable phosphoglycerate mutase.
 
     0.692
SDT21897.1
LytR cell envelope-related transcriptional attenuator.
  
     0.684
SDS28932.1
O-antigen ligase.
 
    0.674
SDS35033.1
Protein of unknown function.
 
     0.608
SDS62358.1
Protein of unknown function.
 
    0.589
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
Server load: low (16%) [HD]