STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS29666.1Uncharacterized conserved protein, DUF58 family, contains vWF domain. (442 aa)    
Predicted Functional Partners:
SDS29766.1
Protein of unknown function.
 
  
 0.969
SDS29822.1
Protein of unknown function.
 
  
 0.969
SDS29893.1
Membrane-anchored glycerophosphoryl diester phosphodiesterase (GDPDase), membrane domain.
 
     0.961
SDS29714.1
MoxR-like ATPase.
  
 0.945
SDS29613.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
  
 0.840
SDS29549.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.797
SDS30037.1
Sporulation and spore germination.
 
     0.737
SDS29994.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
       0.665
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
     
 0.649
SDS29940.1
Two-component system, OmpR family, response regulator MtrA.
       0.552
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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