STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS43608.1Biotin transport system ATP-binding protein. (226 aa)    
Predicted Functional Partners:
SDS43548.1
Biotin transport system permease protein.
 
   
 0.963
SDS43751.1
Biotin transport system substrate-specific component.
 
   
 0.963
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
   
0.909
SDS43714.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
    0.888
SDT11122.1
ABC-2 type transport system ATP-binding protein.
 
    
0.820
SDR83793.1
ABC-2 type transport system ATP-binding protein.
 
     
0.794
SDS43662.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.776
SDR71622.1
ABC-2 type transport system ATP-binding protein.
 
    
0.694
SDS60967.1
ABC-2 type transport system ATP-binding protein.
 
     
0.673
SDS95072.1
Putative ABC transport system permease protein.
 
    0.646
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.