STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS57825.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG. (257 aa)    
Predicted Functional Partners:
SDR85208.1
Enoyl-(Acyl carrier protein) reductase.
 
    0.757
SDT28112.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.753
SDS66301.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.723
SDR83434.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.689
SDS81713.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.652
SDS19806.1
Glucose 1-dehydrogenase.
 
    0.644
SDS82785.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.640
SDR74320.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.623
SDS72571.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
    0.604
SDS57877.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.535
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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