STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS62358.1Protein of unknown function. (407 aa)    
Predicted Functional Partners:
SDS62404.1
Protein of unknown function.
 
     0.822
SDT27178.1
Tight adherence protein B.
 
    0.740
SDR80182.1
Hypothetical protein.
 
     0.733
SDS74477.1
Proteasome accessory factor B.
 
     0.720
SDS56891.1
Hypothetical protein.
  
     0.712
SDS62605.1
Protein of unknown function.
 
     0.702
SDS35783.1
Hypothetical protein.
  
     0.675
SDT22911.1
Protein-disulfide isomerase.
 
     0.655
SDS14434.1
SprT-like family protein.
 
     0.650
SDS09829.1
Hypothetical protein.
 
    0.645
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.