node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS20510.1 | SDS75653.1 | SAMN04489834_1049 | SAMN04489834_2087 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC, A subunit. | 0.630 |
SDS20510.1 | pheT | SAMN04489834_1049 | SAMN04489834_2641 | ATP-dependent DNA helicase PcrA. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.530 |
SDS20510.1 | polA | SAMN04489834_1049 | SAMN04489834_1934 | ATP-dependent DNA helicase PcrA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.691 |
SDS20510.1 | recA | SAMN04489834_1049 | SAMN04489834_2668 | ATP-dependent DNA helicase PcrA. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.835 |
SDS20510.1 | uvrA | SAMN04489834_1049 | SAMN04489834_1946 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.740 |
SDS20510.1 | uvrB | SAMN04489834_1049 | SAMN04489834_1944 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.858 |
SDS20510.1 | uvrC | SAMN04489834_1049 | SAMN04489834_1947 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.719 |
SDS39728.1 | SDS75653.1 | SAMN04489834_1406 | SAMN04489834_2087 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC, A subunit. | 0.563 |
SDS39728.1 | pheT | SAMN04489834_1406 | SAMN04489834_2641 | ATP-dependent DNA helicase, Rep family. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.608 |
SDS39728.1 | polA | SAMN04489834_1406 | SAMN04489834_1934 | ATP-dependent DNA helicase, Rep family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.638 |
SDS39728.1 | recA | SAMN04489834_1406 | SAMN04489834_2668 | ATP-dependent DNA helicase, Rep family. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.860 |
SDS39728.1 | uvrA | SAMN04489834_1406 | SAMN04489834_1946 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.669 |
SDS39728.1 | uvrB | SAMN04489834_1406 | SAMN04489834_1944 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.845 |
SDS39728.1 | uvrC | SAMN04489834_1406 | SAMN04489834_1947 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.657 |
SDS68820.1 | coaE | SAMN04489834_1945 | SAMN04489834_1943 | Hypothetical protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.762 |
SDS68820.1 | uvrB | SAMN04489834_1945 | SAMN04489834_1944 | Hypothetical protein. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.773 |
SDS75653.1 | SDS20510.1 | SAMN04489834_2087 | SAMN04489834_1049 | Excinuclease ABC, A subunit. | ATP-dependent DNA helicase PcrA. | 0.630 |
SDS75653.1 | SDS39728.1 | SAMN04489834_2087 | SAMN04489834_1406 | Excinuclease ABC, A subunit. | ATP-dependent DNA helicase, Rep family. | 0.563 |
SDS75653.1 | polA | SAMN04489834_2087 | SAMN04489834_1934 | Excinuclease ABC, A subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.512 |
SDS75653.1 | recA | SAMN04489834_2087 | SAMN04489834_2668 | Excinuclease ABC, A subunit. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.555 |