Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS63352.1 | SDS75356.1 | SAMN04489834_1840 | SAMN04489834_2081 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.739 |
SDS63352.1 | thyA | SAMN04489834_1840 | SAMN04489834_2680 | Dihydrofolate reductase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.770 |
SDS75260.1 | SDS75310.1 | SAMN04489834_2079 | SAMN04489834_2080 | 3-methyladenine DNA glycosylase AlkD. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.770 |
SDS75260.1 | SDS75356.1 | SAMN04489834_2079 | SAMN04489834_2081 | 3-methyladenine DNA glycosylase AlkD. | Dihydrofolate reductase. | 0.619 |
SDS75260.1 | SDS75393.1 | SAMN04489834_2079 | SAMN04489834_2082 | 3-methyladenine DNA glycosylase AlkD. | L-amino acid N-acyltransferase YncA. | 0.592 |
SDS75260.1 | SDS75456.1 | SAMN04489834_2079 | SAMN04489834_2083 | 3-methyladenine DNA glycosylase AlkD. | TIGR03987 family protein. | 0.432 |
SDS75310.1 | SDS75260.1 | SAMN04489834_2080 | SAMN04489834_2079 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 3-methyladenine DNA glycosylase AlkD. | 0.770 |
SDS75310.1 | SDS75356.1 | SAMN04489834_2080 | SAMN04489834_2081 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | Dihydrofolate reductase. | 0.713 |
SDS75310.1 | SDS75393.1 | SAMN04489834_2080 | SAMN04489834_2082 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | L-amino acid N-acyltransferase YncA. | 0.620 |
SDS75310.1 | SDS75456.1 | SAMN04489834_2080 | SAMN04489834_2083 | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | TIGR03987 family protein. | 0.519 |
SDS75356.1 | SDS63352.1 | SAMN04489834_2081 | SAMN04489834_1840 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.739 |
SDS75356.1 | SDS75260.1 | SAMN04489834_2081 | SAMN04489834_2079 | Dihydrofolate reductase. | 3-methyladenine DNA glycosylase AlkD. | 0.619 |
SDS75356.1 | SDS75310.1 | SAMN04489834_2081 | SAMN04489834_2080 | Dihydrofolate reductase. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.713 |
SDS75356.1 | SDS75393.1 | SAMN04489834_2081 | SAMN04489834_2082 | Dihydrofolate reductase. | L-amino acid N-acyltransferase YncA. | 0.750 |
SDS75356.1 | SDS75456.1 | SAMN04489834_2081 | SAMN04489834_2083 | Dihydrofolate reductase. | TIGR03987 family protein. | 0.533 |
SDS75356.1 | SDT16003.1 | SAMN04489834_2081 | SAMN04489834_2967 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.560 |
SDS75356.1 | thyA | SAMN04489834_2081 | SAMN04489834_2680 | Dihydrofolate reductase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.439 |
SDS75393.1 | SDS75260.1 | SAMN04489834_2082 | SAMN04489834_2079 | L-amino acid N-acyltransferase YncA. | 3-methyladenine DNA glycosylase AlkD. | 0.592 |
SDS75393.1 | SDS75310.1 | SAMN04489834_2082 | SAMN04489834_2080 | L-amino acid N-acyltransferase YncA. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.620 |
SDS75393.1 | SDS75356.1 | SAMN04489834_2082 | SAMN04489834_2081 | L-amino acid N-acyltransferase YncA. | Dihydrofolate reductase. | 0.750 |
page 1 of 2