STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS80887.1Deazaflavin-dependent oxidoreductase, nitroreductase family; Manually curated. (158 aa)    
Predicted Functional Partners:
SDT20140.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.707
SDS06754.1
Probable F420-dependent oxidoreductase, Rv3520c family.
 
     0.626
SDS93850.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
 
     0.617
SDS80850.1
NADPH:quinone reductase.
   
   0.571
SDS94591.1
Luciferase-like monooxygenase.
 
     0.551
SDT24621.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.507
SDS51735.1
Probable F420-dependent oxidoreductase, MSMEG_2906 family.
 
     0.503
SDS12689.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 0.494
SDS98597.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
     0.431
fgd
Coenzyme F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
 
     0.424
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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