STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS86604.1Putative ABC transport system ATP-binding protein. (251 aa)    
Predicted Functional Partners:
SDS95072.1
Putative ABC transport system permease protein.
 
 0.981
SDS86568.1
Putative ABC transport system permease protein.
 
 
 0.975
SDS45631.1
Putative ABC transport system permease protein.
 
 0.967
SDR97769.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
     
0.873
SDR73102.1
Putative ABC transport system permease protein.
 
 0.842
SDT35258.1
Amino acid ABC transporter membrane protein, PAAT family.
 
    0.736
SDT33467.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 0.665
SDT02971.1
Putative ABC transport system permease protein.
 
 0.660
SDS86649.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
   
   0.581
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
 
    0.578
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.