STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS90567.1FHA domain-containing protein. (167 aa)    
Predicted Functional Partners:
SDR78749.1
Serine/threonine protein kinase.
 
 
 
 0.999
SDS31197.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.999
SDS90070.1
Serine/threonine protein kinase.
 
 
 
 0.999
SDR78699.1
Serine/threonine protein kinase.
 
 
 
 0.966
SDS90523.1
DNA-binding transcriptional regulator, MerR family.
 
    0.948
SDS14760.1
Serine/threonine protein kinase.
 
 
 
 0.940
SDS90604.1
CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.842
SDS90478.1
MerR HTH family regulatory protein.
 
  
 0.793
SDR78559.1
FHA domain-containing protein.
  
   
 0.773
SDS90643.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
       0.760
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.