Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS95790.1 | SDS95828.1 | SAMN04489834_2518 | SAMN04489834_2519 | Polyketide cyclase / dehydrase and lipid transport. | GMC oxidoreductase; Belongs to the GMC oxidoreductase family. | 0.778 |
SDS95790.1 | SDS95910.1 | SAMN04489834_2518 | SAMN04489834_2520 | Polyketide cyclase / dehydrase and lipid transport. | DNA-binding transcriptional regulator, AcrR family. | 0.535 |
SDS95790.1 | SDS95948.1 | SAMN04489834_2518 | SAMN04489834_2521 | Polyketide cyclase / dehydrase and lipid transport. | 3-methyladenine DNA glycosylase AlkD. | 0.484 |
SDS95790.1 | acpP | SAMN04489834_2518 | SAMN04489834_2174 | Polyketide cyclase / dehydrase and lipid transport. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.400 |
SDS95828.1 | SDS95790.1 | SAMN04489834_2519 | SAMN04489834_2518 | GMC oxidoreductase; Belongs to the GMC oxidoreductase family. | Polyketide cyclase / dehydrase and lipid transport. | 0.778 |
SDS95828.1 | SDS95910.1 | SAMN04489834_2519 | SAMN04489834_2520 | GMC oxidoreductase; Belongs to the GMC oxidoreductase family. | DNA-binding transcriptional regulator, AcrR family. | 0.560 |
SDS95910.1 | SDS95790.1 | SAMN04489834_2520 | SAMN04489834_2518 | DNA-binding transcriptional regulator, AcrR family. | Polyketide cyclase / dehydrase and lipid transport. | 0.535 |
SDS95910.1 | SDS95828.1 | SAMN04489834_2520 | SAMN04489834_2519 | DNA-binding transcriptional regulator, AcrR family. | GMC oxidoreductase; Belongs to the GMC oxidoreductase family. | 0.560 |
SDS95910.1 | SDS95948.1 | SAMN04489834_2520 | SAMN04489834_2521 | DNA-binding transcriptional regulator, AcrR family. | 3-methyladenine DNA glycosylase AlkD. | 0.535 |
SDS95948.1 | SDS95790.1 | SAMN04489834_2521 | SAMN04489834_2518 | 3-methyladenine DNA glycosylase AlkD. | Polyketide cyclase / dehydrase and lipid transport. | 0.484 |
SDS95948.1 | SDS95910.1 | SAMN04489834_2521 | SAMN04489834_2520 | 3-methyladenine DNA glycosylase AlkD. | DNA-binding transcriptional regulator, AcrR family. | 0.535 |
acpP | SDS95790.1 | SAMN04489834_2174 | SAMN04489834_2518 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Polyketide cyclase / dehydrase and lipid transport. | 0.400 |