STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT04136.1Pyruvate dehydrogenase E1 component alpha subunit. (395 aa)    
Predicted Functional Partners:
SDR81216.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SDS31197.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.999
SDT04084.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SDT04045.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.994
SDR81278.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.977
SDS77447.1
2-oxoglutarate dehydrogenase E2 component.
 0.977
SDS77397.1
Dihydrolipoamide dehydrogenase.
 
 0.963
SDS26704.1
Dihydrolipoamide dehydrogenase.
 
 0.894
SDT21558.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 
 0.829
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
    
 0.780
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.