Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS79427.1 | SDT04659.1 | SAMN04489834_2166 | SAMN04489834_2708 | GIY-YIG catalytic domain-containing protein. | Hypothetical protein. | 0.439 |
SDT04610.1 | SDT04659.1 | SAMN04489834_2707 | SAMN04489834_2708 | Luciferase-like monooxygenase. | Hypothetical protein. | 0.520 |
SDT04659.1 | SDS79427.1 | SAMN04489834_2708 | SAMN04489834_2166 | Hypothetical protein. | GIY-YIG catalytic domain-containing protein. | 0.439 |
SDT04659.1 | SDT04610.1 | SAMN04489834_2708 | SAMN04489834_2707 | Hypothetical protein. | Luciferase-like monooxygenase. | 0.520 |
SDT04659.1 | SDT20210.1 | SAMN04489834_2708 | SAMN04489834_3070 | Hypothetical protein. | DNA-binding transcriptional regulator, FrmR family. | 0.736 |
SDT04659.1 | rpsO | SAMN04489834_2708 | SAMN04489834_2709 | Hypothetical protein. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.439 |
SDT20210.1 | SDT04659.1 | SAMN04489834_3070 | SAMN04489834_2708 | DNA-binding transcriptional regulator, FrmR family. | Hypothetical protein. | 0.736 |
rpsO | SDT04659.1 | SAMN04489834_2709 | SAMN04489834_2708 | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | Hypothetical protein. | 0.439 |