STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT05575.1Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (454 aa)    
Predicted Functional Partners:
SDS67943.1
Glutamate synthase (NADH) large subunit.
  
 
 0.999
SDS73132.1
NAD-dependent protein deacetylase, SIR2 family.
  
 0.989
SDS19984.1
IMP dehydrogenase.
  
 
 0.949
SDS31197.1
2-oxoglutarate dehydrogenase E1 component.
  
 
 0.649
SDS44283.1
Acetolactate synthase, small subunit.
  
  
 0.638
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
    
 0.633
SDT28631.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.624
SDT05616.1
Membrane protein.
  
    0.616
SDR74320.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.599
GltD
Glutamate synthase (NADH) small subunit.
  
 
 0.574
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.