Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR96162.1 | SDR99094.1 | SAMN04489834_0600 | SAMN04489834_0656 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 2-keto-myo-inositol dehydratase. | 0.555 |
SDR96162.1 | SDR99194.1 | SAMN04489834_0600 | SAMN04489834_0658 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 5-deoxyglucuronate isomerase; Manually curated. | 0.745 |
SDR96162.1 | SDR99253.1 | SAMN04489834_0600 | SAMN04489834_0659 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.768 |
SDR96162.1 | SDT12584.1 | SAMN04489834_0600 | SAMN04489834_2885 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Fructose-bisphosphate aldolase class Ia, DhnA family. | 0.483 |
SDR96162.1 | SDT12625.1 | SAMN04489834_0600 | SAMN04489834_2886 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 5-dehydro-2-deoxygluconokinase. | 0.669 |
SDR96162.1 | iolG | SAMN04489834_0600 | SAMN04489834_0657 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). | 0.409 |
SDR99094.1 | SDR96162.1 | SAMN04489834_0656 | SAMN04489834_0600 | 2-keto-myo-inositol dehydratase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.555 |
SDR99094.1 | SDR99194.1 | SAMN04489834_0656 | SAMN04489834_0658 | 2-keto-myo-inositol dehydratase. | 5-deoxyglucuronate isomerase; Manually curated. | 0.948 |
SDR99094.1 | SDR99253.1 | SAMN04489834_0656 | SAMN04489834_0659 | 2-keto-myo-inositol dehydratase. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.961 |
SDR99094.1 | SDT12543.1 | SAMN04489834_0656 | SAMN04489834_2884 | 2-keto-myo-inositol dehydratase. | Transcriptional regulator, GntR family. | 0.475 |
SDR99094.1 | SDT12584.1 | SAMN04489834_0656 | SAMN04489834_2885 | 2-keto-myo-inositol dehydratase. | Fructose-bisphosphate aldolase class Ia, DhnA family. | 0.810 |
SDR99094.1 | SDT12625.1 | SAMN04489834_0656 | SAMN04489834_2886 | 2-keto-myo-inositol dehydratase. | 5-dehydro-2-deoxygluconokinase. | 0.865 |
SDR99094.1 | SDT34399.1 | SAMN04489834_0656 | SAMN04489834_3501 | 2-keto-myo-inositol dehydratase. | Predicted dehydrogenase. | 0.697 |
SDR99094.1 | iolG | SAMN04489834_0656 | SAMN04489834_0657 | 2-keto-myo-inositol dehydratase. | Myo-inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). | 0.926 |
SDR99194.1 | SDR96162.1 | SAMN04489834_0658 | SAMN04489834_0600 | 5-deoxyglucuronate isomerase; Manually curated. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.745 |
SDR99194.1 | SDR99094.1 | SAMN04489834_0658 | SAMN04489834_0656 | 5-deoxyglucuronate isomerase; Manually curated. | 2-keto-myo-inositol dehydratase. | 0.948 |
SDR99194.1 | SDR99253.1 | SAMN04489834_0658 | SAMN04489834_0659 | 5-deoxyglucuronate isomerase; Manually curated. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. | 0.998 |
SDR99194.1 | SDT12543.1 | SAMN04489834_0658 | SAMN04489834_2884 | 5-deoxyglucuronate isomerase; Manually curated. | Transcriptional regulator, GntR family. | 0.739 |
SDR99194.1 | SDT12584.1 | SAMN04489834_0658 | SAMN04489834_2885 | 5-deoxyglucuronate isomerase; Manually curated. | Fructose-bisphosphate aldolase class Ia, DhnA family. | 0.868 |
SDR99194.1 | SDT12625.1 | SAMN04489834_0658 | SAMN04489834_2886 | 5-deoxyglucuronate isomerase; Manually curated. | 5-dehydro-2-deoxygluconokinase. | 0.964 |
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