Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS28468.1 | SDT15386.1 | SAMN04489834_1198 | SAMN04489834_2951 | Predicted membrane protein. | Secretory lipase. | 0.420 |
SDS28468.1 | SDT33697.1 | SAMN04489834_1198 | SAMN04489834_3479 | Predicted membrane protein. | Glycosyl transferases group 1. | 0.405 |
SDS94669.1 | SDT15386.1 | SAMN04489834_2494 | SAMN04489834_2951 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Secretory lipase. | 0.469 |
SDT15316.1 | SDT15353.1 | SAMN04489834_2949 | SAMN04489834_2950 | Probable F420-dependent oxidoreductase, Rv1855c family. | Hypothetical protein. | 0.588 |
SDT15316.1 | SDT15386.1 | SAMN04489834_2949 | SAMN04489834_2951 | Probable F420-dependent oxidoreductase, Rv1855c family. | Secretory lipase. | 0.403 |
SDT15353.1 | SDT15316.1 | SAMN04489834_2950 | SAMN04489834_2949 | Hypothetical protein. | Probable F420-dependent oxidoreductase, Rv1855c family. | 0.588 |
SDT15353.1 | SDT15386.1 | SAMN04489834_2950 | SAMN04489834_2951 | Hypothetical protein. | Secretory lipase. | 0.513 |
SDT15386.1 | SDS28468.1 | SAMN04489834_2951 | SAMN04489834_1198 | Secretory lipase. | Predicted membrane protein. | 0.420 |
SDT15386.1 | SDS94669.1 | SAMN04489834_2951 | SAMN04489834_2494 | Secretory lipase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.469 |
SDT15386.1 | SDT15316.1 | SAMN04489834_2951 | SAMN04489834_2949 | Secretory lipase. | Probable F420-dependent oxidoreductase, Rv1855c family. | 0.403 |
SDT15386.1 | SDT15353.1 | SAMN04489834_2951 | SAMN04489834_2950 | Secretory lipase. | Hypothetical protein. | 0.513 |
SDT15386.1 | SDT15415.1 | SAMN04489834_2951 | SAMN04489834_2952 | Secretory lipase. | Hypothetical protein. | 0.495 |
SDT15386.1 | SDT33697.1 | SAMN04489834_2951 | SAMN04489834_3479 | Secretory lipase. | Glycosyl transferases group 1. | 0.441 |
SDT15386.1 | gcvP | SAMN04489834_2951 | SAMN04489834_2758 | Secretory lipase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.412 |
SDT15415.1 | SDT15386.1 | SAMN04489834_2952 | SAMN04489834_2951 | Hypothetical protein. | Secretory lipase. | 0.495 |
SDT33697.1 | SDS28468.1 | SAMN04489834_3479 | SAMN04489834_1198 | Glycosyl transferases group 1. | Predicted membrane protein. | 0.405 |
SDT33697.1 | SDT15386.1 | SAMN04489834_3479 | SAMN04489834_2951 | Glycosyl transferases group 1. | Secretory lipase. | 0.441 |
gcvP | SDT15386.1 | SAMN04489834_2758 | SAMN04489834_2951 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Secretory lipase. | 0.412 |