STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT18463.1Peptide/nickel transport system permease protein. (319 aa)    
Predicted Functional Partners:
SDT18424.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.969
SDR97769.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.965
SDT18505.1
Peptide/nickel transport system permease protein.
  
 0.965
SDS51090.1
Peptide/nickel transport system ATP-binding protein.
  
 0.952
SDR97824.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.946
SDT18549.1
Peptide/nickel transport system substrate-binding protein.
 
 0.941
SDT18324.1
Alkylhydroperoxidase domain protein, Avi_7169 family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
     0.933
SDT25663.1
ABC transporter.
  
 0.929
SDT18361.1
CMD domain protein, Avi_7170 family.
 
     0.924
SDT33037.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
     0.911
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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