Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDS06314.1 | SDT21959.1 | SAMN04489834_0787 | SAMN04489834_3119 | Cytochrome c biogenesis protein CcdA. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.796 |
| SDS06314.1 | rplK | SAMN04489834_0787 | SAMN04489834_0023 | Cytochrome c biogenesis protein CcdA. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.710 |
| SDS39674.1 | SDT21959.1 | SAMN04489834_1405 | SAMN04489834_3119 | NAD+ diphosphatase; Belongs to the Nudix hydrolase family. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.559 |
| SDT03335.1 | SDT21959.1 | SAMN04489834_2681 | SAMN04489834_3119 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.659 |
| SDT03335.1 | rplK | SAMN04489834_2681 | SAMN04489834_0023 | Thiol-disulfide isomerase or thioredoxin. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.709 |
| SDT21931.1 | SDT21959.1 | SAMN04489834_3118 | SAMN04489834_3119 | Protein of unknown function. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.481 |
| SDT21931.1 | SDT21988.1 | SAMN04489834_3118 | SAMN04489834_3120 | Protein of unknown function. | Nitroreductase. | 0.479 |
| SDT21959.1 | SDS06314.1 | SAMN04489834_3119 | SAMN04489834_0787 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | Cytochrome c biogenesis protein CcdA. | 0.796 |
| SDT21959.1 | SDS39674.1 | SAMN04489834_3119 | SAMN04489834_1405 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | NAD+ diphosphatase; Belongs to the Nudix hydrolase family. | 0.559 |
| SDT21959.1 | SDT03335.1 | SAMN04489834_3119 | SAMN04489834_2681 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | Thiol-disulfide isomerase or thioredoxin. | 0.659 |
| SDT21959.1 | SDT21931.1 | SAMN04489834_3119 | SAMN04489834_3118 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | Protein of unknown function. | 0.481 |
| SDT21959.1 | SDT21988.1 | SAMN04489834_3119 | SAMN04489834_3120 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | Nitroreductase. | 0.809 |
| SDT21959.1 | rplK | SAMN04489834_3119 | SAMN04489834_0023 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.465 |
| SDT21959.1 | rplT | SAMN04489834_3119 | SAMN04489834_2648 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.518 |
| SDT21959.1 | rpmJ | SAMN04489834_3119 | SAMN04489834_1005 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. | 0.460 |
| SDT21959.1 | rpsI | SAMN04489834_3119 | SAMN04489834_1013 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.458 |
| SDT21959.1 | rpsP | SAMN04489834_3119 | SAMN04489834_1631 | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.458 |
| SDT21988.1 | SDT21931.1 | SAMN04489834_3120 | SAMN04489834_3118 | Nitroreductase. | Protein of unknown function. | 0.479 |
| SDT21988.1 | SDT21959.1 | SAMN04489834_3120 | SAMN04489834_3119 | Nitroreductase. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.809 |
| rplK | SDS06314.1 | SAMN04489834_0023 | SAMN04489834_0787 | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Cytochrome c biogenesis protein CcdA. | 0.710 |
page 1 of 3