STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT23326.1Two-component system, OmpR family, response regulator RegX3. (226 aa)    
Predicted Functional Partners:
SDT23364.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 
 0.985
SDR82352.1
Two-component system, OmpR family, sensor histidine kinase TrcS.
 
 0.889
SDS29994.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.877
SDS10268.1
Signal transduction histidine kinase.
 
 0.872
SDT17659.1
Signal transduction histidine kinase.
 
 0.869
SDS95282.1
Two-component system, OmpR family, sensor histidine kinase VanS.
 
 0.865
SDT21721.1
Two-component system, OmpR family, sensor kinase.
 
 0.860
SDT33408.1
Two-component system, OmpR family, sensor kinase.
 
 0.856
SDT23409.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
 
  
 0.710
SDS68142.1
Response regulator receiver and ANTAR domain protein.
 
   
 0.574
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.