STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT26762.1Pimeloyl-ACP methyl ester carboxylesterase. (298 aa)    
Predicted Functional Partners:
SDT26731.1
Acetyl esterase/lipase.
 
     0.781
SDS92898.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
 
   0.606
SDS38163.1
Nucleoside-diphosphate-sugar epimerase.
 
   0.547
SDT26701.1
Hypothetical protein.
       0.493
SDR72537.1
Hypothetical protein.
 
    0.491
SDS22169.1
Hypothetical protein.
 
     0.491
SDR76116.1
Hypothetical protein.
 
     0.469
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.449
SDT26210.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
 
     0.447
SDS58679.1
Protein of unknown function.
 
     0.430
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.