Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDT13441.1 | SDT13536.1 | SAMN04489834_2906 | SAMN04489834_2908 | D-methionine transport system permease protein. | D-methionine transport system substrate-binding protein. | 0.999 |
SDT13441.1 | SDT31381.1 | SAMN04489834_2906 | SAMN04489834_3405 | D-methionine transport system permease protein. | Phosphonate transport system permease protein. | 0.494 |
SDT13536.1 | SDT13441.1 | SAMN04489834_2908 | SAMN04489834_2906 | D-methionine transport system substrate-binding protein. | D-methionine transport system permease protein. | 0.999 |
SDT13536.1 | SDT31381.1 | SAMN04489834_2908 | SAMN04489834_3405 | D-methionine transport system substrate-binding protein. | Phosphonate transport system permease protein. | 0.422 |
SDT19359.1 | SDT31381.1 | SAMN04489834_3047 | SAMN04489834_3405 | PhnB protein. | Phosphonate transport system permease protein. | 0.400 |
SDT31327.1 | SDT31381.1 | SAMN04489834_3403 | SAMN04489834_3405 | Phosphonate transport system substrate-binding protein. | Phosphonate transport system permease protein. | 0.960 |
SDT31327.1 | SDT31406.1 | SAMN04489834_3403 | SAMN04489834_3406 | Phosphonate transport system substrate-binding protein. | Protein-tyrosine phosphatase. | 0.720 |
SDT31327.1 | SDT31440.1 | SAMN04489834_3403 | SAMN04489834_3407 | Phosphonate transport system substrate-binding protein. | Regulatory protein, tetR family. | 0.831 |
SDT31327.1 | phnC | SAMN04489834_3403 | SAMN04489834_3404 | Phosphonate transport system substrate-binding protein. | Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.984 |
SDT31381.1 | SDT13441.1 | SAMN04489834_3405 | SAMN04489834_2906 | Phosphonate transport system permease protein. | D-methionine transport system permease protein. | 0.494 |
SDT31381.1 | SDT13536.1 | SAMN04489834_3405 | SAMN04489834_2908 | Phosphonate transport system permease protein. | D-methionine transport system substrate-binding protein. | 0.422 |
SDT31381.1 | SDT19359.1 | SAMN04489834_3405 | SAMN04489834_3047 | Phosphonate transport system permease protein. | PhnB protein. | 0.400 |
SDT31381.1 | SDT31327.1 | SAMN04489834_3405 | SAMN04489834_3403 | Phosphonate transport system permease protein. | Phosphonate transport system substrate-binding protein. | 0.960 |
SDT31381.1 | SDT31406.1 | SAMN04489834_3405 | SAMN04489834_3406 | Phosphonate transport system permease protein. | Protein-tyrosine phosphatase. | 0.824 |
SDT31381.1 | SDT31440.1 | SAMN04489834_3405 | SAMN04489834_3407 | Phosphonate transport system permease protein. | Regulatory protein, tetR family. | 0.891 |
SDT31381.1 | phnC | SAMN04489834_3405 | SAMN04489834_3404 | Phosphonate transport system permease protein. | Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.997 |
SDT31406.1 | SDT31327.1 | SAMN04489834_3406 | SAMN04489834_3403 | Protein-tyrosine phosphatase. | Phosphonate transport system substrate-binding protein. | 0.720 |
SDT31406.1 | SDT31381.1 | SAMN04489834_3406 | SAMN04489834_3405 | Protein-tyrosine phosphatase. | Phosphonate transport system permease protein. | 0.824 |
SDT31406.1 | SDT31440.1 | SAMN04489834_3406 | SAMN04489834_3407 | Protein-tyrosine phosphatase. | Regulatory protein, tetR family. | 0.955 |
SDT31406.1 | phnC | SAMN04489834_3406 | SAMN04489834_3404 | Protein-tyrosine phosphatase. | Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.836 |
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