STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT31814.1D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family. (341 aa)    
Predicted Functional Partners:
SDT29310.1
Alcohol dehydrogenase.
 
 
 
 0.865
SDT31771.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
 
 
 0.844
SDS97353.1
Threonine dehydrogenase.
 
   0.660
SDS94087.1
D-lactate dehydrogenase.
 
 
 0.522
SDT28631.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.472
SDT12666.1
L-idonate 5-dehydrogenase.
  
0.452
ilvD
Dihydroxyacid dehydratase; Manually curated; Belongs to the IlvD/Edd family.
   
 
 0.446
SDS49531.1
L-threonine 3-dehydrogenase.
 
  
0.434
SDS05838.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
 
  
0.432
SDT12510.1
L-iditol 2-dehydrogenase.
 
  
0.430
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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